Whiiz

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  • in reply to: BDP error (badsubscript) #3528
    Whiiz
    Participant

    Hey,

    having a similar problem, any solutions yet?

    Error in find_bounding_box (line 16)

    Error in EPI_correct_files_registration_INVERSION>trim_msk_PED (line 513)

    Error in EPI_correct_files_registration_INVERSION (line 271)

    Error in coregister_diffusion_mprage_pipeline (line 219)

    Error in BrainSuite_Diffusion_pipeline (line 26)

    MATLAB:badsubscript

    in reply to: Access Denied after CMC command for BDP #3253
    Whiiz
    Participant

    Update:

    It worked after I reinstalled brainsuite21a on the same drive ass the file location.

    Thanks for all your help! :)

    Kind regards,

    Adrien

    in reply to: Access Denied after CMC command for BDP #3252
    Whiiz
    Participant

    I’ve tried to run the tutorial with the material but to no aveil. I still get the error message access denied and that the app cannot be executed. I’ve also tried repairing in admin mode with sfc/ scannow.
    Prompt for reference:
    Microsoft Windows [Version 10.0.19042.1466]
    (c) Microsoft Corporation. Alle Rechte vorbehalten.

    C:\Users\nicad>”D:\Utility\BrainSuite21a\bdp\bdp.exe” C:\Users\nicad\Downloads\BrainSuiteTutorialDWI\2523412.bfc.nii.gz –tensor –FRT –nii C:\Users\nicad\Downloads\BrainSuiteTutorialDWI\2523412.dwi.nii.gz -g C:\Users\nicad\Downloads\BrainSuiteTutorialDWI\2523412.dwi.bvec -b C:\Users\nicad\Downloads\BrainSuiteTutorialDWI\2523412.dwi.bval
    Zugriff verweigert
    (tensor, FRT and nii all with doubledashes of course)

    in reply to: Access Denied after CMC command for BDP #3245
    Whiiz
    Participant

    After installing the 2019b runtime i get the same error.

    in reply to: Access Denied after CMC command for BDP #3243
    Whiiz
    Participant

    Thank you for the quick reply!

    I was running Matlab 2021b and will try it now with 2019b.
    I’m processing my data as follows:
    dicom to nifti using micro GL
    open brainsuite and drag in DTI.nii.gz, then process
    unpack DTI.nii.gz
    open CMC and use the following command:”D:\Utility\BrainSuite21a\bdp\bdp.exe” ”C:\Users\nicad\Desktop\PHD\DTI\Ersatzdaten\DCM2\T1.bfc.nii.gz” –tensor –FRT –FRACT –nii “C:\Users\nicad\Desktop\PHD\DTI\Ersatzdaten\DCM2\DWI.nii” -g “C:\Users\nicad\Desktop\PHD\DTI\Ersatzdaten\DCM2\DWI.bvec“ -b “C:\Users\nicad\Desktop\PHD\DTI\Ersatzdaten\DCM2\DWI.bval“ –generate-stats

    Kind regards,

    Adrien Nicolay

    • This reply was modified 6 months, 3 weeks ago by Whiiz.
    in reply to: Access Denied after CMC command for BDP #3242
    Whiiz
    Participant

    Post deleted

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