- This topic has 17 replies, 6 voices, and was last updated 5 years, 2 months ago by Forough.
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July 11, 2016 at 5:18 pm #273wyParticipant
Hello,
I am still in the processing step, and I’m getting these errors. Please let me know if you can help!
Error occurred during label left hemisphere surface
Error occurred during label right hemisphere surfacedyld: Library not loaded: @ loader_path/libmwmclmcrrt.7.17.dylib
Referenced from: Application/BrainSuite15c/svreg/bin/svreg_label_surf_hemi.app/Contents/MacOS/svreg_label_surf_hemi
Reason: image not found
/Application/BrainSuite15c/svreg/bin/svreg_label_surf_hemi.sh: line 100: 5526 Trace/BPT trap:5 ${exe_dir}/svreg_label_surf_hemi.app/Contents/MacOS/svreg_label_surf_hemi “${FILEPREFIX}” “${ATLASPREFIX}” “${HEMI}” “${FLAGS}”Can someone help please?
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July 11, 2016 at 5:34 pm #274Anand JoshiParticipant
Can you please make sure that you have installed Matlab MCR?
Please make sure that you have followed the installation instructions here:
http://brainsuite.org/quickstart/installation/ -
November 22, 2016 at 10:41 am #580leonidastra86Participant
Same problem here and i have already installed Matlab with the compiler included.
Could you please give us a picture how the text should look like?
I am running MacOs Sierra.Thank you!
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November 22, 2016 at 2:52 pm #581Anand JoshiModerator
Thank you for running BrainSuite. Here are some instructions for MacOS Sierra. Please make sure that you have followed them. Also make sure that you are running the latest version of BrainSuite.
http://brainsuite.org/2016/11/brainsuite-on-macos-sierra-10-12/Thanks,
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November 22, 2016 at 9:28 pm #583leonidastra86Participant
Thank you very much for your answer. I have followed already the instructions, otherwise I wouldn’t be able to reach the last step. I think, however, that I made a mistake in svreg_label_surf_hemi.sh code. I have Matlab 2016a.
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November 22, 2016 at 9:35 pm #584Anand JoshiModerator
Please make sure that you have installed matlab MCR 2015b installed.
The later or earlier versions of Matlab MCR do not work. The exact version 2015b is required. The link for the MCR in the installation instructions.
http://brainsuite.org/quickstart/installation/ -
November 22, 2016 at 9:41 pm #585leonidastra86Participant
OK, I will try it out and let you know. Thank you so much!
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December 19, 2016 at 8:42 am #600yaqiongParticipant
Hi leonidastra,
Did the suggestions help you trouble-shoot the problem? Are you able to run svreg to the end?
I have the similar issue here too.Thanks a lot!
Yaqiong -
December 19, 2016 at 2:35 pm #601leonidastra86Participant
Yes, the problem was fixed but I have to open the program every time through Terminal/Console by uninstalling the temporary files.
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January 2, 2017 at 4:22 pm #621yaqiongParticipant
Did you run /Applications/BrainSuite16a1/BrainSuite16a1.app/Contents/MacOS/BrainSuite16a1 –uninstall
Because when I try to run it the GUI poped up and I did not have a chance to type in “yes” in the terminal to prompt.
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January 2, 2017 at 9:11 pm #622leonidastra86Participant
Exactly, from my Macbook I always run the program through Terminal with
/Applications/BrainSuite16a1/BrainSuite16a1.app/Contents/MacOS/BrainSuite16a1 –uninstall
When I run it from windows, then it is not necessary. -
May 31, 2018 at 2:07 am #1243wyParticipant
I still have the same error despite doing the above recommendation.
I am using brain suite 18a -
May 31, 2018 at 2:50 am #1244leonidastra86Participant
The 18a should work on Mac without using the above recommendation, just run it.
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May 31, 2018 at 3:58 am #1245wyParticipant
I did run it! That’s how i got the error!
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May 31, 2018 at 4:08 am #1246leonidastra86Participant
Do you have preinstalled any older version of brain suite? Try to radically remove everything and then re install it.
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August 16, 2019 at 6:27 am #1867ForoughParticipant
Hi guys
Would you please help me on this error? this occurs in hemisphere labeling step.I changed parameters bu still have this error.
Thanks in advance
‘Labeling left hemisphere
Error using copyfile
The system cannot find the path specified.Error in svreg_label_surf_hemi (line 116)
MATLAB:COPYFILE:OSError’
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September 17, 2019 at 11:25 am #1885Anand JoshiModerator
Have you run the full brainsuite sequence or are directly starting with the labeling step. You should run the entire brainsuite sequence. First please run through the tutorial data available from our website to make sure that the software is installed correctly.
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September 17, 2019 at 11:13 pm #1889ForoughParticipant
Hi Anand
Thanks for your feedback…yes i run the full brainsuite sequence…i run it on my own data in 11 subjects and it works great…but in 5 subject i have this problem…i will installed it again
thanks
Forough
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