[colinrw5]

Hi Guys,
I’m struggling to get a batch (Windows) or script (linux) file up and running all the way to ROI analysis (for automated batch processing).
Does anyone have a working file they can send me as a template?
Many thanks
CRW

[Anand Joshi]

Hi CRW,
Can you please describe the issue a little more? Which script are you trying to run and what is the error?

[Anand Joshi]

There is a cortical_extraction.sh script that runs through the surface generation and there is a script for labeling svreg.sh
These scripts are included in bin and svreg/bin directories respectively.
You can save the extraction settings from here:
file -> save extraction settings

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