Batch / script files

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    • #1520
      colinrw5
      Participant

      Hi Guys,
      I’m struggling to get a batch (Windows) or script (linux) file up and running all the way to ROI analysis (for automated batch processing).
      Does anyone have a working file they can send me as a template?
      Many thanks
      CRW

    • #1521
      Anand Joshi
      Moderator

      Hi CRW,
      Can you please describe the issue a little more? Which script are you trying to run and what is the error?

    • #1522
      Anand Joshi
      Moderator

      There is a cortical_extraction.sh script that runs through the surface generation and there is a script for labeling svreg.sh
      These scripts are included in bin and svreg/bin directories respectively.
      You can save the extraction settings from here:
      file -> save extraction settings

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