Forums › Forums › BrainSuite Diffusion Pipeline (BDP) › Resampling glitch when the NiFTI header is oblique › Reply To: Resampling glitch when the NiFTI header is oblique
Thanks for reporting the issue. Can you please let me know which executable were you using? Was it BDP.sh?
You can try the following workaround for now. You can simply load and save the T1 from brainsuite. It should save the header in brainsuite friendly format. Then proceed with the analysis using this saved T1.