jiafucang

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  • in reply to: BSS run error on data type #148
    jiafucang
    Participant

      Hi David,

      The BSS works. Due to a patsy 0.4.0 version will give numeric error:
      Running the statistical model. This may take a while…
      Something went wrong. Please send this error message to the developers.
      Unexpected error: <type ‘exceptions.ValueError’>
      Traceback (most recent call last):
      File “bss_run.py”, line 89, in bss_run
      statsresult = statsengine.run()
      File “C:\Miniconda\lib\site-packages\bss\stats_engine.py”, line 88, in run
      statsresult = self.commands[self.model.analysis_type + ‘_’ + self.model.stat_test](self.model, self.stats_data)
      File “C:\Miniconda\lib\site-packages\bss\cbm_stats.py”, line 242, in anova_np
      X_design_full = dmatrix(model.fullmodel, data=sdata.demographic_data) # Design matrix for full model
      File “C:\Miniconda\lib\site-packages\patsy\highlevel.py”, line 278, in dmatrix
      NA_action, return_type)
      File “C:\Miniconda\lib\site-packages\patsy\highlevel.py”, line 152, in _do_highlevel_design
      NA_action)
      File “C:\Miniconda\lib\site-packages\patsy\highlevel.py”, line 57, in _try_incr_builders
      NA_action)
      File “C:\Miniconda\lib\site-packages\patsy\build.py”, line 706, in design_matrix_builders
      categories=None)
      File “C:\Miniconda\lib\site-packages\patsy\design_info.py”, line 88, in __init__
      raise ValueError(“For numerical factors, num_columns ”
      ValueError: For numerical factors, num_columns must be an int
      None
      Elapsed time 0.526000022888 sec.

      I updated the patsy to version 0.4.1

      Now it works great.

      Thank you very much!

      Best,
      Fucang

      in reply to: BSS run error on data type #145
      jiafucang
      Participant

        Hi David,

        Thank you very much, I updated to new version, and the problem is fixed. But I encounter some problem related to Miniconda packages, working on that. If the work is done, I will let you know.

        Best,
        Fucang

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