Structure of .eig.nii.gz

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    • #1026
      divarada
      Participant

        You can use the following function available in our source code release to generate eig.nii.gz files that can be visualized on BrainSuite.

        function generate_eig_file(L1, L2, L3, V1, V2, V3, outputFileName)
        %GENERATE_EIG Generate .eig file. Eigenvalues (L1, L2, L3) &
        % Eigenvectors(V1, V2, V3) can be nii structures or .nii.gz or .nii files.
        %
        % outputFileName – file name with/without extension (with full path)
        %

        As you can see in the description, it just needs the tensor eigenvalues and eigenvectors. The function concatenates these files in a certain way that BrainSuite understands. It should be clear when you just look at this function.

        Thanks.

      • #1047
        tderamus
        Participant

          My apologies,

          But I’ve gone through the the BrainSuite GUI and command line tools and the BDP source code and I can’t seem to locate this function in either.

          I can’t seem to locate a command in my linux installation of Brainsuite17a either.

          Would you happen to be able to point me to the download in which is located? Or the command in linux I would use?

        • #1048
          tderamus
          Participant

            Nevermind I just found it in:

            BDP16a_src\data_handling_tools

            Thank you!

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