[David Shattuck]

Hi Nuua –

Just to clarify what you are trying to do : do you basically want to sample the BrainSuite generated tracks into an image volume? Are you looking for a simple binary mask or a tract density map?

We do have some code to do these things. The first is in Matlab, and you can download the source code here:

http://neuroimage.usc.edu/neuro/Resources/TractConnect

Will that provide what you need?

We also have some additional C++ command line tools for this that we haven’t released it publicly yet. I expect we will have those available in the next two weeks.

thanks,
David Shattuck

[Author]

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