Hello experts,
I did not understand how to concatenate the data (.svreg data/images and demographics .csv) from the tutorial slides to analyze using RStudio and BrainSuite visualization. I mean where is exactly the link address to download the .svreg/image/.csv?
So I’ve tried with the BrainSuite exercise subject ‘2523412.nii.gz’ that has the all preprocess data (BFC/SVReg/BDP), and created a .csv arbitrary for R programming (containing, subject ID, gender, and handedness).
RStudio:
> library(bssr)
Finding BrainSuite atlas file paths…Done. Valid BrainSuite installation found at C:/Program Files/BrainSuite21a
> bss_data <- load_bss_data(type=”dbm”,subjdir = “C:/Users/italo/OneDrive/Documentos/DTI/BrainSuite/Data/BrainSuiteTutorialCSE”,csv = “C:/Users/italo/OneDrive/Documentos/DTI/BrainSuite/Data/participants.tsv”, measure=”FA”, smooth=2)
Error: Could not find svreg.log in the subject directory C:/Users/italo/OneDrive/Documentos/DTI/BrainSuite/Data/BrainSuiteTutorialCSE/2523412,M,L. Please check if the subject directory is valid.
> ?check_file_exists
> ?file.path
> check_file_exists(file.path(“C:/Users/italo/OneDrive/Documentos/DTI/BrainSuite/Data/BrainSuiteTutorialCSE”, “2523412”, “*.svreg.log”))
[1] FALSE
> check_file_exists(“C:/Users/italo/OneDrive/Documentos/DTI/BrainSuite/Data/BrainSuiteTutorialCSE/2523412.svreg.log”)
[1] TRUE
How to solve that?