Reply To: ROIs

Anand Joshi

All the ROIs are stored in
*.svreg.label.nii.gz file.
The labels are actually 16-bit volumes, meaning that each structure label is a number between 0 and 65536. To analyze the scans automatically, it’s necessary to know which number corresponds to the region you’re interested in. Open the folder where the scan (and all of the files generated by the CSE sequence and SVReg) are located and open brainsuite_labeldescription.xml

The statistics of cortical thickness, tissue volume etc are stored in