Reply To: Tractography from cmd and results exportation

#5408
IndianPhotoAcademy
Participant

Utilize programs such as FSL (probtrackx2) or MRtrix3 (tckgen) to conduct tractography from the command line. Make sure the proper masks and preprocessed diffusion data are available. MRtrix3 exports results as.tck files, which can be converted to.vtk files using tckconvert. Check the –output flags for FSL. Visually verify the results after post-processing.