BrainSuite

BFC and some other tools in CSE pipeline fail on Nifti image with float64 data

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    • August 31, 2016 at 6:06 pm #320
      GFleishman
      Participant

      Hey guys,

      I have a template I built from nonlinearly registering and averaging 50 baseline ADNI images, I wrote the template out as a .nii.gz file with datatype float64 using nibabel, a python tool for neuroimaging file I/O.

      The CSE pipeline had a really hard time with this image. I wrote the image back out as float32, and it’s working fine. Just thought I would mention it.

    • August 31, 2016 at 8:59 pm #322
      David Shattuck
      Keymaster

      Hi Greg –

      I was planning to put out an updated version of the code this week that fixes another bug. I’ll see if I can fix this as well.

      Do you happen to remember which tools other than BFC failed on the 64-bit input?

      thanks,
      David

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