Reply To: Very bad Skull Stripping

#2381
awenlou29
Participant

    Hi,
    I did it, and here is what I get for one of the images:

    176*256*256
    1mm*1mm*1mm
    data type: sint16
    description:
    position: -87.5 -119.715 -140.245
    file orientation: identity matrix (3×3)
    working orientation : identity matrix (3×3)

    I compared with one of the images provided by Brainsuite for training, and the only differences are the data type and the file orientation (the first term is -1 in the provided example’s matrix instead of 1). Could the problem come from here? Is it fixable?