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  • in reply to: registration process error #1199

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    Hi, I have the same issue. Something is wrong with the warp_points.exe file. The program just stops to work with “Registration error” message. The log is:

    Welcome to BrainSuite18a (build #3115, built with Qt 5.6.3, compiled with MSVC2015 on Feb 28 2018)
    Copyright (C) 2018 The Regents of the University of California
    This program is free software and is released under a GNU General Public License; Version 2. For more details, please see the enclosed license files.
    BrainSuite uses the Qt GUI Toolkit. The Qt GUI Toolkit is Copyright (C) 2015 Digia Plc and/or its subsidiary(-ies) and is licensed under the LGPL v2.1.
    BrainSuite install directory: C:\Program Files\BrainSuite18a
    Using SVReg installed in directory C:\Program Files\BrainSuite18a\svreg
    Finished file preparation 0.000
    Executing: C:\Program Files\BrainSuite18a\svreg\bin\svreg_label_surf_hemi.exe D:\ADMI\BrainSuite\tests\d\IXI603-HH-2701-T1 C:\Program Files\BrainSuite18a\svreg\BrainSuiteAtlas1\mri left -v1
    Executing: C:\Program Files\BrainSuite18a\svreg\bin\svreg_label_surf_hemi.exe D:\ADMI\BrainSuite\tests\d\IXI603-HH-2701-T1 C:\Program Files\BrainSuite18a\svreg\BrainSuiteAtlas1\mri right -v1
    Error running surface labeling. Processing halted.
    left log:
    —–
    Labeling left hemisphere
    Computing mid cortical surfaces
    Checking Euler Characteristic of input surfaces, it should be 1
    Euler characteristic of left Hemi = -3
    New Euler characteristic of left Hemi = -3
    Computing Smooth cortical representation
    Generating Smooth representations of the surface
    Performing L2 registration and flattening
    Computing faces and vertices connectivity
    Applying deformation field from AIR
    Pausing for 5 sec. to clear file buffers
    Using Executable C:\Program Files\BrainSuite18a\svreg\bin\warp_points.exe
    SVREG Warning: .warp file was not in correct format. Continuing after trying to fix.
    Error using readdfs (line 61)
    Unable to read:D:\ADMI\BrainSuite\tests\d\IXI603-HH-2701-T1.svreg.tmp\IXI603-HH-2701-T1.target.left.mid.cortex_smooth10_smooth10.dfs

    Error in surf_align_autocorrect_with_AIR (line 159)

    Error in align_surf_curves (line 62)

    Error in surf_flatten_newbs (line 32)

    Error in svreg_label_surf_hemi (line 163)

    right log:
    —–
    Labeling right hemisphere
    Computing mid cortical surfaces
    Checking Euler Characteristic of input surfaces, it should be 1
    Euler characteristic of right Hemi = 1
    Computing Smooth cortical representation
    Generating Smooth representations of the surface
    Performing L2 registration and flattening
    Computing faces and vertices connectivity
    Applying deformation field from AIR
    Pausing for 5 sec. to clear file buffers
    Using Executable C:\Program Files\BrainSuite18a\svreg\bin\warp_points.exe
    SVREG Warning: .warp file was not in correct format. Continuing after trying to fix.
    Error using readdfs (line 61)
    Unable to read:D:\ADMI\BrainSuite\tests\d\IXI603-HH-2701-T1.svreg.tmp\IXI603-HH-2701-T1.target.right.mid.cortex_smooth10_smooth10.dfs

    Error in surf_align_autocorrect_with_AIR (line 159)

    Error in align_surf_curves (line 62)

    Error in surf_flatten_newbs (line 32)

    Error in svreg_label_surf_hemi (line 163)

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