Tracts visualisation in axial, Sagittal and coronal view

Forums Forums BrainSuite Diffusion Pipeline (BDP) Tracts visualisation in axial, Sagittal and coronal view

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    • #246
      DavideG
      Participant

      Dear all,

      I was trying to visualise my tracts in the three bidimensional views, but I can’t find the way. As well I would like to save some result of the tractography as different tracts, and to give them different colours, and then to visualise them also in the bidimensional views: can you help me?

      Thanks,

      Davide

    • #324
      minqicho
      Participant

      Hi Davide

      Visualizing tracts in 3 views is not directly supported in current version of BrainSuite. But there is an alternate to achieve so. You can use TractConnect (http://neuroimage.usc.edu/neuro/Resources/TractConnect) to generate a mask file for the selected tract. Then if you load the mask file with your 3d image, they will be aligned and visualized in the 3d view.

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