BrainSuite

Tractography from cmd and results exportation

  • This topic has 1 reply, 1 voice, and was last updated 2 years ago by Anonymous.
Viewing 1 reply thread
  • Author
    Posts
    • May 7, 2020 at 11:26 am #2224
      tmedani
      Participant

      Dear Brainsuite team,

      I’m using the Brainsuite with the command line to process DWI data and generate the tensors.

      I have a script and I’m wondering if it’s possible to call the Tracktography module from the command line?
      (from the *.eig files)

      Also, I would like to export the results as TRK files (http://trackvis.org/docs/?subsect=fileformat).

      Is there any command line to use for this purpose?

      Thank you in advance for your help.

      Best regards
      Takfarinas

    • April 2, 2022 at 5:08 pm #3499
      Anonymous
      Inactive

      Hi tmedani

      Did you get all the previous outputs by command line for Cortical Extraction and SVReg?

  • Author
    Posts
Viewing 1 reply thread
  • You must be logged in to reply to this topic.