Merging external ROI files (nii format) to Label description file

Forums Forums BrainSuite Diffusion Pipeline (BDP) Merging external ROI files (nii format) to Label description file

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    • #759
      wstae
      Participant

      I’d like to add external ROI files to subj.svreg.label.nii.gz to generate full connectivity matrix.
      Would you show me the detailed process?

      Sincerely

      Woo-Suk, Tae
      Seoul, Korea

    • #762
      sychoi
      Participant

      There is a number of different ways to do this interactively on the GUI or automated using matlab.

      Are you trying to add ROIs already created in subject or atlas space?
      or are you trying to add new ROIs by manually drawing them in the GUI?

    • #790
      wstae
      Participant

      I’d like to add ROIs (manually drawn with ITKSNAP S/W) in subject space.
      Now I need the interactive method on the GUI.
      If you comment automated pipeline to batch for a large sample (500 subjects), that will be a great help.

      PS: Thank you for 2017 BraiSuite workshop in Vancouver.

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