Compute Thickness Warning Input too may not..

Forums Forums Surface and Volume Registration (SVReg) Compute Thickness Warning Input too may not..

This topic contains 2 replies, has 2 voices, and was last updated by  Anand Joshi 6 months ago.

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  • #1143

    moratti
    Participant

    Dear All,

    First, thanks a lot for the great development of the Brainsuite toolbox. I tried for the first time to compute cortical thickness using Brainsuite (17a) on a iMAC (high sierra).

    During the “Commute Thickness” process (started from GUI) I get a warning (Input too may not be achievable by PCG, Try to use a bigger tolerance -> in pcg(line88) in thicknessPVC (line 159).

    Should I try to run this process from the command line? Is there a possibility to change the tolerance (should I?). Thanks for your input and help!

    Best,
    Stephan

  • #1144

    moratti
    Participant

    …I forgot to mention that i have used the 2523412.nii.gz file from the Brainsuite tutorial…

    best,

    Stephan

  • #1177

    Anand Joshi
    Moderator

    If the thickness looks ok, then don’t worry about the warning. Usually, it does not cause any problems, it is just a precaution.

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