BFC and some other tools in CSE pipeline fail on Nifti image with float64 data

Forums Forums Cortical Surface Extraction BFC and some other tools in CSE pipeline fail on Nifti image with float64 data

This topic contains 1 reply, has 2 voices, and was last updated by  David Shattuck 3 years, 7 months ago.

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  • #320

    GFleishman
    Participant

    Hey guys,

    I have a template I built from nonlinearly registering and averaging 50 baseline ADNI images, I wrote the template out as a .nii.gz file with datatype float64 using nibabel, a python tool for neuroimaging file I/O.

    The CSE pipeline had a really hard time with this image. I wrote the image back out as float32, and it’s working fine. Just thought I would mention it.

  • #322

    David Shattuck
    Keymaster

    Hi Greg –

    I was planning to put out an updated version of the code this week that fixes another bug. I’ll see if I can fix this as well.

    Do you happen to remember which tools other than BFC failed on the 64-bit input?

    thanks,
    David

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