BDP stop working

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    • #1329
      jottino
      Participant

      Dear,

      I left BDP running the entire weekend and this Monday I got the message I attach below. I haven’t modified any important file. BDP worked fine since I got this error. Now I’m trying to run the same command again and I get this error again and again. Any clue?

      Thank you in advance,
      J

      ————————————————————————
      std::terminate() detected at Mon Jun 18 10:25:54 2018
      ————————————————————————

      Configuration:
      Crash Decoding : Disabled
      Crash Mode : continue (default)
      Default Encoding : UTF-8
      GNU C Library : 2.27 stable
      Host Name : UB51552
      MATLAB Architecture : glnxa64
      MATLAB Root : /usr/local/MATLAB/MATLAB_Runtime/v90
      MATLAB Version : 8.6.0.267246 (R2015b)
      Operating System : Linux 4.15.0-23-generic #25-Ubuntu SMP Wed May 23 18:02:16 UTC 2018 x86_64
      Processor ID : x86 Family 6 Model 94 Stepping 3, GenuineIntel

      Fault Count: 1

      Abnormal termination:
      std::terminate()

      Register State (captured):
      RAX = 0000000000000000 RBX = 00007eff805a9888
      RCX = 000000000000000a RDX = 00007eff80598b78
      RSP = 00007fffcfa8e610 RBP = 00007fffcfa8e9d0
      RSI = 00007eff8034d275 RDI = 00007fffcfa8e620

      R8 = 0000000000000000 R9 = 00007eff88d8ccd0
      R10 = 0000ffff00001fa0 R11 = 0000000000000000
      R12 = 00007eff805b98c0 R13 = 00007fffcfa8f610
      R14 = 00007fffcfa8f5f0 R15 = 00007fffcfa8f9d0

      RIP = 00007eff802a7b0e EFL = 0000000000000000

      CS = 0000 FS = 0000 GS = 0000

      Stack Trace (captured):
      [ 0] 0x00007eff802a7b0e /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwfl.so+00969486 _ZN2fl4diag5linux6x86_6412context_base12capture_dataEv+00000030
      [ 1] 0x00007eff802a4fe4 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwfl.so+00958436
      [ 2] 0x00007eff79d73845 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmcr.so+00784453
      [ 3] 0x00007eff79d75740 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmcr.so+00792384
      [ 4] 0x00007eff79d75831 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmcr.so+00792625
      [ 5] 0x00007eff79d75bb3 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmcr.so+00793523
      [ 6] 0x00007eff79d75c23 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmcr.so+00793635
      [ 7] 0x00007eff88b00386 /usr/local/MATLAB/MATLAB_Runtime/v90/sys/os/glnxa64/libstdc++.so.6+00385926
      [ 8] 0x00007eff88b003b3 /usr/local/MATLAB/MATLAB_Runtime/v90/sys/os/glnxa64/libstdc++.so.6+00385971
      [ 9] 0x00007eff88b003c6 /usr/local/MATLAB/MATLAB_Runtime/v90/sys/os/glnxa64/libstdc++.so.6+00385990
      [ 10] 0x00007eff88b00010 /usr/local/MATLAB/MATLAB_Runtime/v90/sys/os/glnxa64/libstdc++.so.6+00385040 __cxa_call_unexpected+00000048
      [ 11] 0x00007eff82a4ef4c /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwdservices.so+00208716 _ZN24dsDirectoryExclusiveLock7acquireERKN5boost10posix_time13time_durationEb+00002668
      [ 12] 0x00007eff82a4f1a3 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwdservices.so+00209315 _ZN24dsDirectoryExclusiveLock7acquireEb+00000035
      [ 13] 0x00007eff726314bc /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmclmcr.so+02774204 _ZN5boost11unique_lockI24dsDirectoryExclusiveLockE4lockEv+00000028
      [ 14] 0x00007eff7262ebd0 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmclmcr.so+02763728
      [ 15] 0x00007eff725d0949 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmclmcr.so+02378057
      [ 16] 0x00007eff725d0eb0 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmclmcr.so+02379440 _ZN5boost6detail8function21function_obj_invoker0INS_3_bi6bind_tINS_10shared_ptrI21mclExtractedComponentEEPFS7_N6mclmcr12CtfExtractorEENS3_5list1INS3_5valueIS9_EEEEEES7_E6invokeERNS1_15function_bufferE+00000048
      [ 17] 0x00007eff72608e2f /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmclmcr.so+02608687 _ZNK5boost9function0INS_10shared_ptrI21mclExtractedComponentEEEclEv+00000031
      [ 18] 0x00007eff72607dbf /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmclmcr.so+02604479 _Z30mclInitializeComponentInstanceRKN5boost8functionIFiPKcEEES6_NS_9function0INS_10shared_ptrI21mclExtractedComponentEEEE+00000239
      [ 19] 0x00007eff725eba55 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmclmcr.so+02488917
      [ 20] 0x00007eff7a51bdfc /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmclbase.so+00400892 _ZNK5boost9function0IiEclEv+00000028
      [ 21] 0x00007eff6f12ca9c /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwMVMLocal.so+00539292 _ZNK5boost9function1IiRKSt6vectorISbIDsSt11char_traitsIDsESaIDsEESaIS5_EEEclES9_+00000028
      [ 22] 0x00007eff79d4baed /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmcr.so+00621293
      [ 23] 0x00007eff79d4beb0 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmcr.so+00622256
      [ 24] 0x00007eff79d4c134 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmcr.so+00622900 _Z12mcr_run_mainRKN5boost9function0IiEEbb+00000228
      [ 25] 0x00007eff6f122f9d /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwMVMLocal.so+00499613
      [ 26] 0x00007eff7a20bcf7 /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmvm.so+02432247
      [ 27] 0x00007eff7a51b4bb /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmclbase.so+00398523 mclRunMain+00000459
      [ 28] 0x00007eff725edddb /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwmclmcr.so+02498011 mclStandaloneGenericMain+00001275
      [ 29] 0x00007eff892117cd /usr/local/MATLAB/MATLAB_Runtime/v90/bin/glnxa64/libmwlaunchermain.so+00055245
      [ 30] 0x0000000000409650 /opt/BrainSuite18a/bdp/bdp+00038480
      [ 31] 0x00007eff87f00b97 /lib/x86_64-linux-gnu/libc.so.6+00138135 __libc_start_main+00000231
      [ 32] 0x0000000000404c35 /opt/BrainSuite18a/bdp/bdp+00019509

      If this problem is reproducible, please submit a Service Request via:
      http://www.mathworks.com/support/contact_us/

      A technical support engineer might contact you with further information.

      Thank you for your help.** This crash report has been saved to disk as /home/jottino/matlab_crash_dump.4418-1 **

      MATLAB is exiting because of fatal error
      /opt/BrainSuite18a/bdp/bdp.sh: lĂ­nea 643: 4418 Terminado (killed) ${exe_dir}/bdp $args

      • This topic was modified 2 years ago by jottino.
    • #1383
      divarada
      Participant

      This looks like matlab runtime has crashed – have you tried running BDP on a different machine or reinstalling matlab runtime ?

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