BDP error (badsubscript)

[balukrishnan]

Hi

I am getting the following error when I run BDP on my data

Transforming input file to diffusion coordinates: T1.niiSubscript indices must either be real positive integers or logicals.

Error in check_nifti_file (line 34)

Error in transfer_T1_to_diffusion (line 52)

Error in coregister_diffusion_mprage_pipeline (line 333)

Error in BrainSuite_Diffusion_pipeline (line 26)

MATLAB:badsubscript

Can anyone help me with debugging it?

Balu

[Taylorariko]

Hello,

I am having a similar problem. Any help?

>>/Applications/BrainSuite21a/bdp/bdp.sh T1.bfc.nii.gz –nii DW.nii –bval bval.bval –bvec bvec.bvec

BDP Version: 21a (build #0081), released 2021-05-05

================================================================================
Setting up dataset and inputs
================================================================================
Reading input flags…
Did not detect –FRT/–FRACT/–tensor/–3dshore/–gqi/–erfo. Using default
setting of estimating tensors.

Checking input files…
Array indices must be positive integers or logical values.

Error in check_nifti_file (line 34)

Error in bdp_setup (line 894)

Error in BrainSuite_Diffusion_pipeline (line 13)

MATLAB:badsubscript

>>

Thanks!
Taylor

[Whiiz]

Hey,

having a similar problem, any solutions yet?

Error in find_bounding_box (line 16)

Error in EPI_correct_files_registration_INVERSION>trim_msk_PED (line 513)

Error in EPI_correct_files_registration_INVERSION (line 271)

Error in coregister_diffusion_mprage_pipeline (line 219)

Error in BrainSuite_Diffusion_pipeline (line 26)

MATLAB:badsubscript

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