Automatic Processing Using Command-Line / missing \bin\bse.exe

Forums Forums Cortical Surface Extraction Automatic Processing Using Command-Line / missing \bin\bse.exe

This topic contains 0 replies, has 1 voice, and was last updated by  NaglisR 2 years, 2 months ago.

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  • #1102


    Hi everyone,

    I am trying to perform cortical surface extraction using the command line as is described in here ( using Windows. I am able to find a file cortical_extraction.cmd which contains a line:
    if not exist “%BrainSuitePath%\bin\bse.exe” (
    echo Could not find BrainSuite binaries. Quitting…
    However, in my installation folder which is C:\Program Files\BrainSuite17a, the bin folder doesn’t contain a bse.exe file.
    Is this a bug? How can I use the cortical surface extraction using cmd in Windows?

    Thanks in advance!

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