AC-PC alignment

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    • #373
      Vinny
      Participant

      Does the BrainSuite software perform AC-PC alignment?

    • #374
      Anand Joshi
      Moderator

      The SVReg registration module performs full anatomical alignment of subject to atlas. This alignment is much more accurate than AC-PC alignment. Can you please explain some more about why you want to do AC-PC alignment? Is it for visualization purpose?

    • #375
      Vinny
      Participant

      Yes that is correct, my goal is tractography. I’ve seen some process workflows use MIPAV for AC-PC alignment prior to diffusion weighted image preprocessing using TORTOISE, as part of the AFNI distribution.

    • #608
      Anand Joshi
      Moderator

      For tractography and finding connectivity across regions, we do not need AC PC alignment in BrainSuite.
      http://brainsuite.org/processing/diffusion/tractography/

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