About Bias field correcction tool

Forums Forums Bug Reports About Bias field correcction tool

This topic contains 4 replies, has 2 voices, and was last updated by  Anand Joshi 1 year, 9 months ago.

  • Author
    Posts
  • #326

    LucaF
    Participant

    Dear all,
    Sometimes I used BFC tool for increase contrast and get better inner cortical resolution.
    Usually I run brain exctraction untill non-uniformity correction then I load the result .bfc using BFC script. The .bfc output from the last version of brainsuite (16a) is not read by BFC script.
    Does someone already notice it?
    All the best
    Luca

  • #327

    Anand Joshi
    Moderator

    Hi Luca, Are you using Linux/Mac/Windows? There is a bias filed correction script now included with BrainSuite 16a. It is in C:\Program Files\BrainSuite16a\svreg\bin\gui_bias_correct.exe .
    Are you using this?

  • #338

    LucaF
    Participant

    Yes I’m using that version and also the version downloaded from Brainsuite additional tools.
    Anyway, the results is the same, when I try to load .bfc file an error occur (line 7).
    Luca

  • #339

    LucaF
    Participant

    Sorry I get the problem, it was my fault, I was not running until tissue classification.
    Now it works correctly,
    Soory again
    Luca

    • #362

      Anand Joshi
      Moderator

      great! I am happy that it is working now!

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