Reply To: DTI in MNI space

Forums Forums BrainSuite Diffusion Pipeline (BDP) DTI in MNI space Reply To: DTI in MNI space

#640
Anand Joshi
Moderator

I think the best way is to demarcate the spherical ROIs on the BrainSuiteAtlas1. If you already have the ROIs in MNI space, then you have to somehow merge them with BrainSuiteAtlas1. BrainSuiteAtlas1 is in MNI space, so it should be easy.
Make a custom atlas with all the ROIs that you would be using.

http://brainsuite.org/processing/svreg/creating-custom-atlases/

And then proceed with the BrainSuite, SVReg and BDP sequences as usual. The new ROIs will be incorporated into your analysis.

  • This reply was modified 3 years, 10 months ago by Anand Joshi.