Reply To: Very bad Skull Stripping

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#2381
awenlou29
Participant

Hi,
I did it, and here is what I get for one of the images:

176*256*256
1mm*1mm*1mm
data type: sint16
description:
position: -87.5 -119.715 -140.245
file orientation: identity matrix (3×3)
working orientation : identity matrix (3×3)

I compared with one of the images provided by Brainsuite for training, and the only differences are the data type and the file orientation (the first term is -1 in the provided example’s matrix instead of 1). Could the problem come from here? Is it fixable?